User contributions
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- 16:49, 25 April 2018 (diff | hist) . . (+8,066) . . N Phylogenetics: BEAST2 Lab (Created page with "{| border="0" |- |rowspan="2" valign="top"|150px |<span style="font-size: x-large">[http://hydrodictyon.eeb.uconn.edu/eebedia/index.php/Phylogenetics:_S...")
- 17:11, 13 April 2018 (diff | hist) . . (+55) . . Ggtree (→Start R and Load Packages)
- 16:50, 13 April 2018 (diff | hist) . . (0) . . m Ggtree (→Tip Labels)
- 16:50, 13 April 2018 (diff | hist) . . (+94) . . Ggtree (→Get Situated on the Cluster)
- 18:35, 3 April 2018 (diff | hist) . . (+34) . . Phylogenetics: APE Lab (→Phylogenetic Generalized Least Squares (PGLS) regression)
- 18:34, 3 April 2018 (diff | hist) . . (-25) . . Phylogenetics: APE Lab (→Label interior nodes with the contrasts)
- 18:33, 3 April 2018 (diff | hist) . . (+25) . . Phylogenetics: APE Lab (→Label interior nodes with the contrasts)
- 18:00, 3 April 2018 (diff | hist) . . (-212) . . Phylogenetics: APE Lab (→Birth/death analysis)
- 17:58, 3 April 2018 (diff | hist) . . (+25) . . Phylogenetics: APE Lab (→Birth/death analysis)
- 17:54, 3 April 2018 (diff | hist) . . (+62) . . Phylogenetics: APE Lab
- 18:54, 30 March 2018 (diff | hist) . . (-29) . . Phylogenetics: BayesTraits Lab
- 18:53, 30 March 2018 (diff | hist) . . (-296) . . Phylogenetics: BayesTraits Lab
- 17:19, 23 March 2018 (diff | hist) . . (+19) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 17:01, 23 March 2018 (diff | hist) . . (+1) . . Phylogenetics: Morphology and Partitioning in MrBayes (→The prset command)
- 22:09, 20 March 2018 (diff | hist) . . (+18) . . Prospective Student Mark Stukel
- 13:51, 9 March 2018 (diff | hist) . . (0) . . Phylogenetics: MrBayes Lab (→Specifying the prior on kappa)
- 22:03, 7 March 2018 (diff | hist) . . (-17) . . Ggtree (→Getting Started)
- 22:02, 7 March 2018 (diff | hist) . . (+114) . . Ggtree (→Getting Started)
- 14:42, 7 March 2018 (diff | hist) . . (+39) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018) (current)
- 01:02, 7 March 2018 (diff | hist) . . (-2) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018)
- 00:56, 7 March 2018 (diff | hist) . . (-213) . . Josh Justison Visit to Storrs (→Wednesday, March 7, 2018)
- 00:56, 7 March 2018 (diff | hist) . . (-16) . . Josh Justison Visit to Storrs (→Friday, March 9, 2018)
- 00:56, 7 March 2018 (diff | hist) . . (-16) . . Josh Justison Visit to Storrs (→Friday, March 9, 2018)
- 00:56, 7 March 2018 (diff | hist) . . (-16) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018)
- 00:55, 7 March 2018 (diff | hist) . . (-38) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018)
- 21:59, 6 March 2018 (diff | hist) . . (+24) . . Josh Justison Visit to Storrs (→Friday, March 9, 2018)
- 18:54, 6 March 2018 (diff | hist) . . (+8) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018)
- 15:04, 6 March 2018 (diff | hist) . . (+23) . . Josh Justison Visit to Storrs (→Thursday, March 8, 2018)
- 14:20, 6 March 2018 (diff | hist) . . (+3) . . Josh Justison Visit to Storrs (→Wednesday, March 7, 2018)
- 14:20, 6 March 2018 (diff | hist) . . (+6) . . Josh Justison Visit to Storrs (→Wednesday, March 7, 2018)
- 14:20, 6 March 2018 (diff | hist) . . (-63) . . Josh Justison Visit to Storrs (→Wednesday, March 7, 2018)
- 21:22, 5 March 2018 (diff | hist) . . (+1,307) . . N Josh Justison Visit to Storrs (Created page with " == '''Josh Justison''' == Josh is taking time out from his final semester at the University of Minnesota, where he is majoring in Biology and minoring in Computer Science, t...")
- 19:20, 2 March 2018 (diff | hist) . . (+7) . . Phylogenetics: R Primer
- 08:15, 23 February 2018 (diff | hist) . . (+1,708) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 07:15, 23 February 2018 (diff | hist) . . (+263) . . Phylogenetics: Simulating sequence data (→Enter the Felsenstein Zone)
- 07:12, 23 February 2018 (diff | hist) . . (+208) . . Phylogenetics: Simulating sequence data (→Have Some Fun)
- 06:59, 23 February 2018 (diff | hist) . . (+2) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 06:57, 23 February 2018 (diff | hist) . . (+78) . . Phylogenetics: Simulating sequence data (→Enter the Felsenstein Zone)
- 06:55, 23 February 2018 (diff | hist) . . (+229) . . Phylogenetics: Simulating sequence data (→Submitted for Your Approval: The Felsenstein Zone)
- 06:45, 23 February 2018 (diff | hist) . . (+27) . . Phylogenetics: Simulating sequence data (→Execute the NEXUS File)
- 06:40, 23 February 2018 (diff | hist) . . (-696) . . Phylogenetics: Simulating sequence data (→Execute the NEXUS File)
- 06:37, 23 February 2018 (diff | hist) . . (+327) . . Phylogenetics: Simulating sequence data (→Exploring the NEXUS File)
- 04:29, 23 February 2018 (diff | hist) . . (+90) . . Phylogenetics: Simulating sequence data
- 14:13, 22 February 2018 (diff | hist) . . (+432) . . Phylogenetics: Simulating sequence data (→Goals)
- 19:12, 16 February 2018 (diff | hist) . . (0) . . IQ-Tree (→Appendix 3)
- 19:10, 16 February 2018 (diff | hist) . . (+17) . . IQ-Tree
- 19:32, 9 February 2018 (diff | hist) . . (+113) . . Phylogenetics: Large Scale Maximum Likelihood Analyses (→Challenge) (current)
- 19:29, 9 February 2018 (diff | hist) . . (-2) . . Phylogenetics: Large Scale Maximum Likelihood Analyses
- 19:22, 9 February 2018 (diff | hist) . . (+1,393) . . Phylogenetics: Large Scale Maximum Likelihood Analyses (→Comparing GARLI and RAxML Using PAUP*)
- 19:46, 30 January 2018 (diff | hist) . . (+41) . . Phylogenetics: Likelihood Lab (→Determining significance)
- 19:45, 30 January 2018 (diff | hist) . . (+85) . . Phylogenetics: Likelihood Lab (→Determining significance)
- 19:42, 30 January 2018 (diff | hist) . . (0) . . N File:Chisq.png (current)
- 19:18, 30 January 2018 (diff | hist) . . (+9) . . Phylogenetics: Likelihood Lab (→A challenge)
- 19:40, 28 January 2018 (diff | hist) . . (+223) . . Phylogenetics: Likelihood Lab (→A challenge)
- 19:40, 28 January 2018 (diff | hist) . . (+42) . . Phylogenetics: Likelihood Lab (→Download the data file algae.nex)
- 19:36, 28 January 2018 (diff | hist) . . (+8) . . Phylogenetics: Likelihood Lab (→What parameters make the fit of the model significantly better?)
- 19:34, 28 January 2018 (diff | hist) . . (+297) . . Phylogenetics: Likelihood Lab (→What parameters make the fit of the model significantly better?)
- 19:31, 28 January 2018 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab (→What parameters make the fit of the model significantly better>)
- 19:31, 28 January 2018 (diff | hist) . . (+72) . . Phylogenetics: Likelihood Lab (→Determining significance)
- 19:30, 28 January 2018 (diff | hist) . . (+1,724) . . Phylogenetics: Likelihood Lab (→Likelihood ratio tests)
- 17:54, 28 January 2018 (diff | hist) . . (+32) . . Phylogenetics: Likelihood Lab (→Obtain the maximum likelihood tree under the F81 model)
- 17:48, 28 January 2018 (diff | hist) . . (+8) . . Phylogenetics: Likelihood Lab (→Obtain the maximum likelihood tree under the F81 model)
- 17:48, 28 January 2018 (diff | hist) . . (-10) . . Phylogenetics: Likelihood Lab (→Obtain the maximum likelihood tree under the F81 model)
- 17:47, 28 January 2018 (diff | hist) . . (+91) . . Phylogenetics: Likelihood Lab (→Obtain the maximum likelihood tree under the F81 model)
- 17:35, 28 January 2018 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab (→Trees block)
- 17:33, 28 January 2018 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab (→Data block)
- 17:31, 28 January 2018 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab (→Create a data file)
- 17:31, 28 January 2018 (diff | hist) . . (+172) . . Phylogenetics: Likelihood Lab (→Getting started)
- 17:29, 28 January 2018 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab
- 21:52, 26 January 2018 (diff | hist) . . (+183) . . Phylogenetics: Python Primer (→Install a text editor)
- 21:48, 26 January 2018 (diff | hist) . . (-5) . . Phylogenetics: Python Primer (→Install a text editor)
- 21:37, 26 January 2018 (diff | hist) . . (+67) . . Phylogenetics: Python Primer (→Lists and tuples)
- 21:33, 26 January 2018 (diff | hist) . . (-1) . . Phylogenetics: Python Primer (→Lists and tuples)
- 21:30, 26 January 2018 (diff | hist) . . (+175) . . Phylogenetics: Python Primer (→Installing Python)
- 19:14, 25 January 2018 (diff | hist) . . (+225) . . Phylogenetics: MrBayes Lab (→(q)login to the cluster)
- 17:15, 25 January 2018 (diff | hist) . . (+11,503) . . N Systematics Seminar Fall 2017 (Created page with "This is the home page of the UConn EEB department's Systematics Seminar (EEB 6486). This is a graduate seminar devoted to issues of interest to graduate students and faculty w...")
- 19:18, 23 January 2018 (diff | hist) . . (+169) . . Phylogenetics: Searching Lab (→Exhaustive parsimony search)
- 18:08, 23 January 2018 (diff | hist) . . (-110) . . Phylogenetics: Searching Lab (→Compare NJ with a comparable heuristic search)
- 18:08, 23 January 2018 (diff | hist) . . (-133) . . Phylogenetics: Searching Lab (→Compare NJ with a comparable heuristic search)
- 18:07, 23 January 2018 (diff | hist) . . (+118) . . Phylogenetics: Searching Lab (→Compare NJ with a comparable heuristic search)
- 18:02, 23 January 2018 (diff | hist) . . (+9) . . Phylogenetics: Searching Lab (→Using SplitsTree)
- 18:01, 23 January 2018 (diff | hist) . . (+238) . . Phylogenetics: Searching Lab (→Getting started)
- 17:47, 23 January 2018 (diff | hist) . . (-101) . . Phylogenetics: Searching Lab (→Determine NNI rearrangements)
- 19:04, 19 January 2018 (diff | hist) . . (+12) . . Phylogenetics: Bioinformatics Cluster (→If you use Windows...) (current)
- 16:17, 19 January 2018 (diff | hist) . . (+27) . . Phylogenetics: Introduction to PAUP* (→Defining sets of sites)
- 20:43, 18 January 2018 (diff | hist) . . (+9) . . Phylogenetics: Bioinformatics Cluster (→SSH)
- 15:38, 18 January 2018 (diff | hist) . . (+14) . . Phylogenetics: Bioinformatics Cluster (→Creating run.nex using the nano editor)
- 15:27, 18 January 2018 (diff | hist) . . (+1) . . Phylogenetics: Bioinformatics Cluster (→A few more UNIX commands)
- 15:26, 18 January 2018 (diff | hist) . . (+44) . . Phylogenetics: Bioinformatics Cluster (→(Mac/Linux users only) Using scp to upload the algae.nex data file)
- 15:25, 18 January 2018 (diff | hist) . . (+6) . . Phylogenetics: Bioinformatics Cluster (→(Mac users only) Using scp to upload the algae.nex data file)
- 15:23, 18 January 2018 (diff | hist) . . (+212) . . Phylogenetics: Bioinformatics Cluster (→Creating run.nex using the nano editor)
- 22:47, 12 January 2018 (diff | hist) . . (-856) . . Phylogenetics: Introduction to PAUP* (→Sets block)
- 22:45, 12 January 2018 (diff | hist) . . (-1) . . Phylogenetics: Introduction to PAUP* (→Using PAUP to create a NEXUS data file)
- 22:44, 12 January 2018 (diff | hist) . . (+41) . . Phylogenetics: Introduction to PAUP*
- 22:39, 12 January 2018 (diff | hist) . . (+230) . . Phylogenetics: Bioinformatics Cluster (→Starting a PAUP* analysis)
- 22:34, 12 January 2018 (diff | hist) . . (+26) . . Phylogenetics: Bioinformatics Cluster (→Create the gopaup file)
- 18:59, 12 January 2018 (diff | hist) . . (-234) . . Phylogenetics: Bioinformatics Cluster
- 22:59, 27 November 2017 (diff | hist) . . (+352) . . Systematics Seminar
- 01:58, 26 November 2017 (diff | hist) . . (+26) . . Systematics Seminar (→Nov. 27 (next meeting))
- 01:57, 26 November 2017 (diff | hist) . . (+15) . . Systematics Seminar (→Nov. 27)
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