User contributions
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- 18:13, 9 April 2020 (diff | hist) . . (+4) . . Phylogenetics: SMap lab (→Literature Cited)
- 18:11, 9 April 2020 (diff | hist) . . (+38) . . Phylogenetics: SMap lab (→Stochastic mapping for the self-incompatibility trait)
- 18:10, 9 April 2020 (diff | hist) . . (+3) . . Phylogenetics: SMap lab (→Stochastic mapping for the self-incompatibility trait)
- 17:32, 9 April 2020 (diff | hist) . . (+71) . . Phylogenetics: SMap lab (→ML analysis of the self-incompatibility trait)
- 17:30, 9 April 2020 (diff | hist) . . (+237) . . Phylogenetics: SMap lab (→ML analysis of the self-incompatibility trait)
- 17:23, 9 April 2020 (diff | hist) . . (+498) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 17:16, 9 April 2020 (diff | hist) . . (+41) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 16:59, 9 April 2020 (diff | hist) . . (+5) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 16:58, 9 April 2020 (diff | hist) . . (+165) . . Phylogenetics: SMap lab (→Mating system trait)
- 16:55, 9 April 2020 (diff | hist) . . (-1) . . Phylogenetics: SMap lab (→Two traits)
- 16:54, 9 April 2020 (diff | hist) . . (-38) . . Phylogenetics: SMap lab (→Two traits)
- 16:53, 9 April 2020 (diff | hist) . . (+5) . . Phylogenetics: SMap lab (→Two traits)
- 16:32, 9 April 2020 (diff | hist) . . (+122) . . Phylogenetics: SMap lab (→Two traits)
- 16:30, 9 April 2020 (diff | hist) . . (-5) . . Phylogenetics: SMap lab (→Downloading the data for the tutorial)
- 16:28, 9 April 2020 (diff | hist) . . (+71) . . Phylogenetics: SMap lab (→Tour of the output files)
- 14:03, 9 April 2020 (diff | hist) . . (+369) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:42, 9 April 2020 (diff | hist) . . (-35) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:39, 9 April 2020 (diff | hist) . . (+51) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:37, 9 April 2020 (diff | hist) . . (+30) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:35, 9 April 2020 (diff | hist) . . (-4) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:35, 9 April 2020 (diff | hist) . . (+104) . . Phylogenetics: SMap lab (→Tour of the output files)
- 12:25, 9 April 2020 (diff | hist) . . (+33) . . Phylogenetics: SMap lab (→Minimal Example)
- 12:22, 9 April 2020 (diff | hist) . . (+27) . . Phylogenetics: SMap lab (→Minimal Example)
- 12:21, 9 April 2020 (diff | hist) . . (+1,375) . . Phylogenetics: SMap lab (→Making sMap easier to invoke)
- 02:46, 8 April 2020 (diff | hist) . . (+361) . . Phylogenetics: SMap lab (→Tour of the output files)
- 02:25, 8 April 2020 (diff | hist) . . (+590) . . Phylogenetics: SMap lab (→Tour of the output files)
- 02:06, 8 April 2020 (diff | hist) . . (-1) . . Phylogenetics: SMap lab (→Minimal Example)
- 02:06, 8 April 2020 (diff | hist) . . (-4) . . Phylogenetics: SMap lab (→Minimal Example)
- 02:05, 8 April 2020 (diff | hist) . . (+2,051) . . Phylogenetics: SMap lab (→Tour of the output files)
- 01:16, 8 April 2020 (diff | hist) . . (+52) . . Phylogenetics: SMap lab (→Tour of the output files)
- 01:15, 8 April 2020 (diff | hist) . . (+12) . . Phylogenetics: SMap lab (→Minimal Example)
- 01:04, 8 April 2020 (diff | hist) . . (+1,966) . . Phylogenetics: SMap lab (→Making sMap easier to invoke)
- 19:22, 7 April 2020 (diff | hist) . . (+133) . . Phylogenetics: SMap lab (→ML analysis of the self-incompatibility trait)
- 19:19, 7 April 2020 (diff | hist) . . (+45) . . Phylogenetics: SMap lab (→ML analyses)
- 13:23, 7 April 2020 (diff | hist) . . (+146) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 13:20, 7 April 2020 (diff | hist) . . (+65) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 13:14, 7 April 2020 (diff | hist) . . (+2) . . Phylogenetics: SMap lab (→ML analysis of the self-incompatibility trait)
- 02:20, 7 April 2020 (diff | hist) . . (+320) . . Phylogenetics: SMap lab
- 02:16, 7 April 2020 (diff | hist) . . (+62) . . Phylogenetics: SMap lab (→ML analysis of the self-incompatibility trait)
- 02:14, 7 April 2020 (diff | hist) . . (-900) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 00:13, 7 April 2020 (diff | hist) . . (+166) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 00:10, 7 April 2020 (diff | hist) . . (+168) . . Phylogenetics: SMap lab (→ML analysis of the flower morphology trait)
- 00:08, 7 April 2020 (diff | hist) . . (+2,016) . . Phylogenetics: SMap lab (→ML analyses)
- 20:45, 6 April 2020 (diff | hist) . . (-2) . . Phylogenetics: SMap lab (→Downloading the data for the tutorial)
- 20:44, 6 April 2020 (diff | hist) . . (+448) . . Phylogenetics: SMap lab (→Download sMap)
- 20:40, 6 April 2020 (diff | hist) . . (+274) . . Phylogenetics: SMap lab (→Download sMap)
- 20:36, 6 April 2020 (diff | hist) . . (+445) . . Phylogenetics: SMap lab (→Stochastic mapping for the self-incompatibility trait)
- 17:34, 6 April 2020 (diff | hist) . . (0) . . Phylogenetics: SMap lab (→Stochastic mapping for the self-incompatibility trait)
- 17:34, 6 April 2020 (diff | hist) . . (+516) . . Phylogenetics: SMap lab (→Download sMap)
- 17:28, 6 April 2020 (diff | hist) . . (+8) . . Phylogenetics: SMap lab (→Stochastic mapping for the self-incompatibility trait)
- 17:27, 6 April 2020 (diff | hist) . . (+839) . . Phylogenetics: SMap lab
- 17:12, 6 April 2020 (diff | hist) . . (0) . . Phylogenetics: SMap lab
- 17:12, 6 April 2020 (diff | hist) . . (+463) . . Phylogenetics: SMap lab (→Mating system trait)
- 16:57, 6 April 2020 (diff | hist) . . (+4) . . Phylogenetics: SMap lab (→Self-compatibility trait)
- 16:56, 6 April 2020 (diff | hist) . . (+2,691) . . Phylogenetics: SMap lab (→Downloading the data for the tutorial)
- 16:15, 6 April 2020 (diff | hist) . . (+401) . . Phylogenetics: SMap lab
- 15:46, 4 April 2020 (diff | hist) . . (+2,007) . . N Phylogenetics: SMap lab (Created page with "{| border="0" |- |rowspan="2" valign="top"|150px |<span style="font-size: x-large">[http://hydrodictyon.eeb.uconn.edu/eebedia/index.php/Phylogenetics:_S...")
- 15:44, 30 March 2020 (diff | hist) . . (+29) . . Phylogenetics: Simulating sequence data (current)
- 15:20, 30 March 2020 (diff | hist) . . (+262) . . Phylogenetics: BayesTraits Lab (→Estimating ancestral states) (current)
- 15:17, 30 March 2020 (diff | hist) . . (+603) . . Phylogenetics: BayesTraits Lab (→Challenge)
- 14:47, 30 March 2020 (diff | hist) . . (+42) . . Phylogenetics: BayesTraits Lab (→Challenge)
- 14:46, 30 March 2020 (diff | hist) . . (+856) . . Phylogenetics: BayesTraits Lab (→Estimating ancestral states)
- 14:23, 30 March 2020 (diff | hist) . . (+6) . . Phylogenetics: BayesTraits Lab (→Estimating ancestral states)
- 14:19, 30 March 2020 (diff | hist) . . (+268) . . Phylogenetics: BayesTraits Lab (→Bayesian Reversible-jump MCMC)
- 14:11, 30 March 2020 (diff | hist) . . (+44) . . Phylogenetics: BayesTraits Lab (→Estimating ancestral states)
- 14:04, 30 March 2020 (diff | hist) . . (+18) . . Phylogenetics: BayesTraits Lab (→Bayesian Reversible-jump MCMC)
- 13:44, 30 March 2020 (diff | hist) . . (+356) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 13:34, 30 March 2020 (diff | hist) . . (+260) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 13:24, 30 March 2020 (diff | hist) . . (0) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Dependence model)
- 13:24, 30 March 2020 (diff | hist) . . (0) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Dependence model)
- 13:22, 30 March 2020 (diff | hist) . . (0) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 13:22, 30 March 2020 (diff | hist) . . (+41) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 13:21, 30 March 2020 (diff | hist) . . (-36) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 13:18, 30 March 2020 (diff | hist) . . (-6) . . Phylogenetics: BayesTraits Lab (→Download BayesTraits)
- 13:17, 30 March 2020 (diff | hist) . . (+2) . . Phylogenetics: BayesTraits Lab (→Download BayesTraits)
- 13:16, 30 March 2020 (diff | hist) . . (-24) . . Phylogenetics: BayesTraits Lab (→Download the tree and data files)
- 13:15, 30 March 2020 (diff | hist) . . (+212) . . Phylogenetics: BayesTraits Lab (→Download the tree and data files)
- 13:13, 30 March 2020 (diff | hist) . . (+1) . . Phylogenetics: BayesTraits Lab (→Download BayesTraits)
- 13:13, 30 March 2020 (diff | hist) . . (-196) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 12:45, 30 March 2020 (diff | hist) . . (+31) . . Phylogenetics: BayesTraits Lab (→Download the tree and data files)
- 12:44, 30 March 2020 (diff | hist) . . (+25) . . Phylogenetics: BayesTraits Lab (→Download the tree and data files)
- 12:40, 30 March 2020 (diff | hist) . . (-36) . . Phylogenetics: BayesTraits Lab (→Download BayesTraits)
- 12:39, 30 March 2020 (diff | hist) . . (+1,497) . . Phylogenetics: BayesTraits Lab
- 17:21, 27 March 2020 (diff | hist) . . (+3) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method) (current)
- 16:03, 27 March 2020 (diff | hist) . . (+27) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Challenge)
- 22:49, 20 March 2020 (diff | hist) . . (+13) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Challenge)
- 22:22, 20 March 2020 (diff | hist) . . (-4) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Interpreting the results)
- 21:19, 20 March 2020 (diff | hist) . . (-18) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 20:40, 20 March 2020 (diff | hist) . . (+48) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 20:35, 20 March 2020 (diff | hist) . . (+36) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Analyzing the output)
- 20:18, 20 March 2020 (diff | hist) . . (+41) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Create a slurm submit script)
- 19:43, 20 March 2020 (diff | hist) . . (0) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Analyzing the output)
- 19:41, 20 March 2020 (diff | hist) . . (+27) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Create a slurm submit script)
- 19:41, 20 March 2020 (diff | hist) . . (-74) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Login to Xanadu)
- 19:03, 20 March 2020 (diff | hist) . . (+53) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Login to Xanadu)
- 19:00, 20 March 2020 (diff | hist) . . (-1) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Create a slurm submit script)
- 18:59, 20 March 2020 (diff | hist) . . (-50) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Create a slurm submit script)
- 18:59, 20 March 2020 (diff | hist) . . (+13) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Finishing the MrBayes block)
- 18:57, 20 March 2020 (diff | hist) . . (+592) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Specifying branch length and gamma shape priors)
- 18:09, 20 March 2020 (diff | hist) . . (-145) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Creating a command file)
- 18:08, 20 March 2020 (diff | hist) . . (+13) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Creating a command file)
- 18:07, 20 March 2020 (diff | hist) . . (+709) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Creating a command file)
- 18:03, 20 March 2020 (diff | hist) . . (-25) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Creating a command file)
- 18:01, 20 March 2020 (diff | hist) . . (+144) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Downloading the data file)
- 17:59, 20 March 2020 (diff | hist) . . (-326) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Running MrBayes on Xanadu)
- 17:55, 20 March 2020 (diff | hist) . . (+160) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Downloading the data file)
- 17:53, 20 March 2020 (diff | hist) . . (+138) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Running MrBayes on the cluster)
- 14:30, 20 March 2020 (diff | hist) . . (-8) . . Phylogenetics: Morphology and Partitioning in MrBayes (→The Nylander et al. study)
- 01:34, 9 March 2020 (diff | hist) . . (-146) . . Phylogenetics: MrBayes Lab (→Using Tracer to summarize MCMC results) (current)
- 01:18, 9 March 2020 (diff | hist) . . (+48) . . Phylogenetics: MrBayes Lab (→Running MrBayes and interpreting the results)
- 01:10, 9 March 2020 (diff | hist) . . (+47) . . Phylogenetics: MrBayes Lab (→Running MrBayes and interpreting the results)
- 01:10, 9 March 2020 (diff | hist) . . (+85) . . Phylogenetics: MrBayes Lab (→Running MrBayes and interpreting the results)
- 01:08, 9 March 2020 (diff | hist) . . (+97) . . Phylogenetics: MrBayes Lab (→Running MrBayes and interpreting the results)
- 01:04, 9 March 2020 (diff | hist) . . (+13) . . Phylogenetics: MrBayes Lab (→Specifying a prior on base frequencies)
- 01:01, 9 March 2020 (diff | hist) . . (+2) . . Phylogenetics: MrBayes Lab (→Specifying the prior on kappa)
- 00:53, 9 March 2020 (diff | hist) . . (-119) . . Phylogenetics: MrBayes Lab (→Creating a MRBAYES block)
- 00:49, 9 March 2020 (diff | hist) . . (-11) . . Phylogenetics: MrBayes Lab (→Download and save the data file)
- 00:48, 9 March 2020 (diff | hist) . . (-212) . . Phylogenetics: MrBayes Lab (→(q)login to the cluster)
- 16:09, 2 March 2020 (diff | hist) . . (-96) . . Phylogenetics: R Primer (→Starting R)
- 16:07, 2 March 2020 (diff | hist) . . (+349) . . Phylogenetics: R Primer (→Getting Help)
- 16:04, 2 March 2020 (diff | hist) . . (-475) . . Phylogenetics: R Primer (→Goals)
- 16:02, 2 March 2020 (diff | hist) . . (-663) . . Phylogenetics: R Primer (→Challenge!)
- 16:02, 2 March 2020 (diff | hist) . . (-1,223) . . Phylogenetics: R Primer (→Running ggtree on your Computer)
- 16:01, 2 March 2020 (diff | hist) . . (0) . . Phylogenetics: R Primer (→Cite ggtree)
- 16:00, 2 March 2020 (diff | hist) . . (+939) . . Phylogenetics: R Primer (→Plotting trees in R)
- 14:37, 2 March 2020 (diff | hist) . . (+220) . . Phylogenetics: R Primer (→Clade Labels)
- 14:35, 2 March 2020 (diff | hist) . . (-10) . . Phylogenetics: R Primer (→Clade Labels)
- 14:35, 2 March 2020 (diff | hist) . . (+1) . . Phylogenetics: R Primer (→Clade Colors)
- 14:35, 2 March 2020 (diff | hist) . . (-9) . . Phylogenetics: R Primer (→Clade Colors)
- 14:34, 2 March 2020 (diff | hist) . . (-1) . . Phylogenetics: R Primer (→Clade Labels)
- 14:34, 2 March 2020 (diff | hist) . . (-128) . . Phylogenetics: R Primer (→Clade Labels)
- 14:32, 2 March 2020 (diff | hist) . . (+15) . . Phylogenetics: R Primer (→Clade Labels)
- 14:29, 2 March 2020 (diff | hist) . . (+3) . . Phylogenetics: R Primer (→Clade Colors)
- 14:28, 2 March 2020 (diff | hist) . . (-6) . . Phylogenetics: R Primer (→Clade Colors)
- 14:27, 2 March 2020 (diff | hist) . . (+131) . . Phylogenetics: R Primer (→Clade Colors)
- 14:22, 2 March 2020 (diff | hist) . . (+394) . . Phylogenetics: R Primer (→Saving to a PDF)
- 14:18, 2 March 2020 (diff | hist) . . (+1,809) . . Phylogenetics: R Primer (→Tip Labels)
- 14:00, 2 March 2020 (diff | hist) . . (+9) . . Phylogenetics: R Primer (→Plotting the tree)
- 13:58, 2 March 2020 (diff | hist) . . (+152) . . Phylogenetics: R Primer (→Reading and storing a tree)
- 13:55, 2 March 2020 (diff | hist) . . (+8) . . Phylogenetics: R Primer (→Install ggtree)
- 13:01, 2 March 2020 (diff | hist) . . (+435) . . Phylogenetics: R Primer (→Plotting trees in R)
- 01:19, 2 March 2020 (diff | hist) . . (+32) . . Phylogenetics: R Primer (→Node Labels)
- 01:17, 2 March 2020 (diff | hist) . . (-183) . . Phylogenetics: R Primer (→Node Labels)
- 23:50, 1 March 2020 (diff | hist) . . (+7) . . Phylogenetics: R Primer (→Clade Labels)
- 23:49, 1 March 2020 (diff | hist) . . (-817) . . Phylogenetics: R Primer (→Clade Labels)
- 23:18, 1 March 2020 (diff | hist) . . (+110) . . Phylogenetics: R Primer (→Clade Colors)
- 22:36, 1 March 2020 (diff | hist) . . (-86) . . Phylogenetics: R Primer (→Tip Labels)
- 22:13, 1 March 2020 (diff | hist) . . (0) . . Phylogenetics: R Primer (→Clade Labels)
- 21:45, 1 March 2020 (diff | hist) . . (+16,309) . . Phylogenetics: R Primer
- 21:05, 1 March 2020 (diff | hist) . . (0) . . Phylogenetics: R Primer (→Another way to view Dirichlet samples)
- 21:05, 1 March 2020 (diff | hist) . . (+275) . . Phylogenetics: R Primer (→Asymmetrical Dirichlet distributions)
- 20:24, 1 March 2020 (diff | hist) . . (+114) . . Phylogenetics: R Primer (→Dirichlet distribution)
- 20:14, 1 March 2020 (diff | hist) . . (+206) . . Phylogenetics: R Primer (→Relationship to the Gamma distribution)
- 20:07, 1 March 2020 (diff | hist) . . (+8) . . Phylogenetics: R Primer (→Relationship to the Gamma distribution)
- 20:05, 1 March 2020 (diff | hist) . . (-3) . . Phylogenetics: R Primer (→Relationship to the Gamma distribution)
- 19:48, 1 March 2020 (diff | hist) . . (-91) . . Phylogenetics: R Primer (→Relationship to the Gamma distribution)
- 19:47, 1 March 2020 (diff | hist) . . (-1) . . Phylogenetics: R Primer (→Asymmetrical Beta distributions)
- 19:46, 1 March 2020 (diff | hist) . . (-15) . . Phylogenetics: R Primer (→Beta distribution)
- 19:33, 1 March 2020 (diff | hist) . . (+7) . . Phylogenetics: R Primer (→Exponential distribution)
- 19:12, 1 March 2020 (diff | hist) . . (+156) . . Phylogenetics: R Primer (→Gamma distribution)
- 18:56, 1 March 2020 (diff | hist) . . (+194) . . Phylogenetics: R Primer (→Gamma distribution)
- 18:37, 1 March 2020 (diff | hist) . . (+8) . . Phylogenetics: R Primer (→Gamma distribution)
- 18:36, 1 March 2020 (diff | hist) . . (+123) . . Phylogenetics: R Primer (→Data frames)
- 18:27, 1 March 2020 (diff | hist) . . (-447) . . Phylogenetics: R Primer (→Creating a plot)
- 18:09, 1 March 2020 (diff | hist) . . (+140) . . Phylogenetics: R Primer (→Creating a histogram)
- 18:07, 1 March 2020 (diff | hist) . . (-3) . . Phylogenetics: R Primer (→Installing R)
- 18:06, 1 March 2020 (diff | hist) . . (+192) . . Phylogenetics: R Primer (→Installing R)
- 18:00, 1 March 2020 (diff | hist) . . (-45) . . Phylogenetics: R Primer (→Creating plots using R)
- 17:59, 1 March 2020 (diff | hist) . . (-25) . . Phylogenetics: R Primer (→Installing RStudio)
- 17:57, 1 March 2020 (diff | hist) . . (+41) . . Phylogenetics: R Primer (→Sarting R)
- 17:56, 1 March 2020 (diff | hist) . . (+42) . . Phylogenetics: R Primer (→Installing RStudio)
- 17:56, 1 March 2020 (diff | hist) . . (+293) . . Phylogenetics: R Primer (→Installing R)
- 17:42, 1 March 2020 (diff | hist) . . (+298) . . Phylogenetics: R Primer
- 12:02, 26 February 2020 (diff | hist) . . (-1) . . m Phylogenetics: HyPhy Lab (→Create a tree representing the null hypothesis) (current)
- 23:06, 25 February 2020 (diff | hist) . . (+14) . . Phylogenetics: HyPhy Lab (→Constructing the likelihood function)
- 23:01, 25 February 2020 (diff | hist) . . (+314) . . Phylogenetics: HyPhy Lab (→RELAX)
- 22:19, 25 February 2020 (diff | hist) . . (+1,068) . . Phylogenetics: HyPhy Lab (→RELAX)
- 21:59, 25 February 2020 (diff | hist) . . (+482) . . Phylogenetics: HyPhy Lab (→RELAX)
- 21:53, 25 February 2020 (diff | hist) . . (+237) . . Phylogenetics: HyPhy Lab (→RELAX)
- 20:29, 25 February 2020 (diff | hist) . . (-4) . . Phylogenetics: HyPhy Lab (→Part 1)
- 18:58, 25 February 2020 (diff | hist) . . (+1,371) . . Phylogenetics: HyPhy Lab
- 18:44, 25 February 2020 (diff | hist) . . (+1,502) . . Phylogenetics: HyPhy Lab (→Goal)
- 20:54, 24 February 2020 (diff | hist) . . (-6) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 20:41, 24 February 2020 (diff | hist) . . (+1) . . Phylogenetics: HyPhy Lab (→Loading modules needed)
- 20:40, 24 February 2020 (diff | hist) . . (+24) . . Phylogenetics: HyPhy Lab (→Loading modules needed)
- 20:31, 24 February 2020 (diff | hist) . . (+535) . . Phylogenetics: HyPhy Lab (→Final exercise)
- 20:25, 24 February 2020 (diff | hist) . . (+4,093) . . Phylogenetics: HyPhy Lab (→Ready to simulate!)
- 19:56, 24 February 2020 (diff | hist) . . (+1) . . Phylogenetics: HyPhy Lab (→Ready to simulate!)
- 19:56, 24 February 2020 (diff | hist) . . (+2,995) . . Phylogenetics: HyPhy Lab (→Fixing up edge lengths)
- 19:35, 24 February 2020 (diff | hist) . . (-685) . . Phylogenetics: HyPhy Lab (→Fixing up edge lengths)
- 19:23, 24 February 2020 (diff | hist) . . (+1,616) . . Phylogenetics: HyPhy Lab (→Fixing up edge lengths)
- 19:11, 24 February 2020 (diff | hist) . . (+10) . . Phylogenetics: HyPhy Lab (→Define the HKY85 rate matrix)
- 19:11, 24 February 2020 (diff | hist) . . (+13) . . Phylogenetics: HyPhy Lab (→Define the HKY85 rate matrix)
- 19:09, 24 February 2020 (diff | hist) . . (+1,499) . . Phylogenetics: HyPhy Lab (→Don't get too comfortable just yet)
- 18:53, 24 February 2020 (diff | hist) . . (-2) . . Phylogenetics: HyPhy Lab (→Don't get too comfortable just yet)
- 18:52, 24 February 2020 (diff | hist) . . (+1,355) . . Phylogenetics: HyPhy Lab (→Don't get too comfortable just yet)
- 18:35, 24 February 2020 (diff | hist) . . (+738) . . Phylogenetics: HyPhy Lab (→Creating the second model)
- 18:30, 24 February 2020 (diff | hist) . . (+1,774) . . Phylogenetics: HyPhy Lab (→Create a tree representing the null hypothesis)
- 18:17, 24 February 2020 (diff | hist) . . (+16) . . Phylogenetics: HyPhy Lab
- 18:16, 24 February 2020 (diff | hist) . . (+2,775) . . Phylogenetics: HyPhy Lab
- 17:38, 24 February 2020 (diff | hist) . . (+624) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 17:32, 24 February 2020 (diff | hist) . . (+8) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 17:25, 24 February 2020 (diff | hist) . . (+26) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 17:18, 24 February 2020 (diff | hist) . . (+65) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 15:26, 24 February 2020 (diff | hist) . . (+1,797) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 14:50, 24 February 2020 (diff | hist) . . (+323) . . Phylogenetics: HyPhy Lab (→Creating the HyPhy batch file)
- 14:48, 24 February 2020 (diff | hist) . . (-17,448) . . Phylogenetics: HyPhy Lab
- 14:24, 24 February 2020 (diff | hist) . . (+27) . . Phylogenetics: HyPhy Lab (→Loading modules needed)
- 14:19, 24 February 2020 (diff | hist) . . (+2) . . Phylogenetics: HyPhy Lab (→Loading modules needed)
- 14:19, 24 February 2020 (diff | hist) . . (+9) . . Phylogenetics: HyPhy Lab (→HyPhy)
- 14:18, 24 February 2020 (diff | hist) . . (-19) . . Phylogenetics: HyPhy Lab (→Login to Xanadu)
- 03:03, 24 February 2020 (diff | hist) . . (+88) . . Phylogenetics: HyPhy Lab
- 15:38, 17 February 2020 (diff | hist) . . (+165) . . Phylogenetics: Simulating sequence data (→Strimmer and Rambaut (2002) Study)
- 14:56, 17 February 2020 (diff | hist) . . (-44) . . Phylogenetics: Simulating sequence data (→Strimmer and Rambaut (2002) Study)
- 14:37, 17 February 2020 (diff | hist) . . (-15) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 14:33, 17 February 2020 (diff | hist) . . (+258) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 14:26, 17 February 2020 (diff | hist) . . (+92) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 02:46, 17 February 2020 (diff | hist) . . (+16) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 02:42, 17 February 2020 (diff | hist) . . (-2) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 02:41, 17 February 2020 (diff | hist) . . (+6) . . Phylogenetics: Simulating sequence data (→Saving Simulated Data)
- 02:24, 17 February 2020 (diff | hist) . . (-70) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 02:23, 17 February 2020 (diff | hist) . . (+239) . . Phylogenetics: Simulating sequence data (→Execute the NEXUS File)
- 02:20, 17 February 2020 (diff | hist) . . (-103) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 02:19, 17 February 2020 (diff | hist) . . (+61) . . Phylogenetics: Simulating sequence data (→Execute the NEXUS File)
- 02:13, 17 February 2020 (diff | hist) . . (-96) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 02:09, 17 February 2020 (diff | hist) . . (-35) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 02:07, 17 February 2020 (diff | hist) . . (-188) . . Phylogenetics: Simulating sequence data (→Simulation Template)
- 01:56, 17 February 2020 (diff | hist) . . (-115) . . Phylogenetics: Simulating sequence data (→Enter the Felsenstein Zone)
- 01:56, 17 February 2020 (diff | hist) . . (-27) . . Phylogenetics: Simulating sequence data (→Execute the NEXUS File)
- 01:36, 17 February 2020 (diff | hist) . . (+308) . . Phylogenetics: Simulating sequence data (→Strimmer and Rambaut (2002) Study)
- 01:29, 17 February 2020 (diff | hist) . . (+52) . . Phylogenetics: Simulating sequence data (→Strimmer and Rambaut (2002) Study)
- 01:19, 17 February 2020 (diff | hist) . . (+80) . . Phylogenetics: Simulating sequence data (→Strimmer and Rambaut (2002) Study)
- 13:12, 10 February 2020 (diff | hist) . . (+3,352) . . Phylogenetics: Using IQ-TREE for multilocus likelihood analyses (→Getting started) (current)
- 12:40, 10 February 2020 (diff | hist) . . (+1,257) . . N Phylogenetics: Using IQ-TREE for multilocus likelihood analyses (Created page with "{| border="0" |- |rowspan="2" valign="top"|200px |<span style="font-size: x-large">[http://phylogeny.uconn.edu/courses/ EEB 5349: Phylogenetics]</span>...")
- 19:38, 3 February 2020 (diff | hist) . . (+63) . . Phylogenetics: Likelihood Lab (→Likelihood ratio tests) (current)
- 19:37, 3 February 2020 (diff | hist) . . (0) . . Phylogenetics: Likelihood Lab (→Determining significance)
- 19:32, 3 February 2020 (diff | hist) . . (-59) . . Phylogenetics: Likelihood Lab (→Estimate both pinvar and the gamma shape parameter)
- 19:13, 3 February 2020 (diff | hist) . . (+388) . . Phylogenetics: Likelihood Lab (→What parameters make the fit of the model significantly better?)
- 19:08, 3 February 2020 (diff | hist) . . (+9) . . Phylogenetics: Likelihood Lab (→Estimate both pinvar and the gamma shape parameter)
- 19:04, 3 February 2020 (diff | hist) . . (+306) . . Phylogenetics: Likelihood Lab (→Estimate both pinvar and the gamma shape parameter)
- 19:03, 3 February 2020 (diff | hist) . . (+189) . . Phylogenetics: Likelihood Lab (→Estimate the heterogeneity in rates among sites)
- 18:59, 3 February 2020 (diff | hist) . . (+6) . . Phylogenetics: Likelihood Lab (→Estimate the proportion of invariable sites)
- 18:58, 3 February 2020 (diff | hist) . . (+302) . . Phylogenetics: Likelihood Lab (→Estimate the proportion of invariable sites)
- 18:53, 3 February 2020 (diff | hist) . . (+287) . . Phylogenetics: Likelihood Lab (→Estimate transition/transversion bias)
- 18:48, 3 February 2020 (diff | hist) . . (+250) . . Phylogenetics: Likelihood Lab (→Estimate base frequencies)
- 18:45, 3 February 2020 (diff | hist) . . (+190) . . Phylogenetics: Likelihood Lab (→Obtain the maximum likelihood tree under the F81 model)
- 18:19, 3 February 2020 (diff | hist) . . (-135) . . Phylogenetics: Likelihood Lab
- 00:33, 3 February 2020 (diff | hist) . . (-116) . . Phylogenetics: Python Primer (current)
- 20:18, 28 January 2020 (diff | hist) . . (-60) . . Phylogenetics: Searching Lab (→Compare NJ with a comparable heuristic search) (current)
- 19:49, 28 January 2020 (diff | hist) . . (+33) . . Phylogenetics: Searching Lab (→Exercise to turn in before the end of lab)
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