User contributions
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- 11:09, 14 April 2016 (diff | hist) . . (+217) . . Phylogenetics: BEAST Lab (→Setting up MCMC)
- 02:12, 14 April 2016 (diff | hist) . . (+1,066) . . Phylogenetics: BEAST Lab (→Analysis of relaxed-clock simulated data)
- 01:57, 14 April 2016 (diff | hist) . . (+1,117) . . Phylogenetics: BEAST Lab (→Analysis of relaxed-clock simulated data)
- 01:16, 14 April 2016 (diff | hist) . . (+746) . . Phylogenetics: BEAST Lab (→Analysis of relaxed-clock simulated data)
- 01:07, 14 April 2016 (diff | hist) . . (+51) . . Phylogenetics: BEAST Lab (→Using TreeAnnotator and FigTree to examine the tree and divergence time credible intervals)
- 01:06, 14 April 2016 (diff | hist) . . (+13) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 20:01, 13 April 2016 (diff | hist) . . (+280) . . Phylogenetics: BEAST Lab (→Looking at the results)
- 19:59, 13 April 2016 (diff | hist) . . (+1,564) . . Phylogenetics: BEAST Lab (→Looking at the results)
- 19:48, 13 April 2016 (diff | hist) . . (+1,215) . . Phylogenetics: BEAST Lab (→Looking at the results)
- 19:29, 13 April 2016 (diff | hist) . . (+255) . . Phylogenetics: BEAST Lab (→Setting up MCMC)
- 19:26, 13 April 2016 (diff | hist) . . (+189) . . Phylogenetics: BEAST Lab (→Running BEAST on the cluster)
- 19:11, 13 April 2016 (diff | hist) . . (-11) . . Phylogenetics: BEAST Lab (→Setting up MCMC)
- 19:10, 13 April 2016 (diff | hist) . . (-217) . . Phylogenetics: BEAST Lab (→Setting up the Priors)
- 19:10, 13 April 2016 (diff | hist) . . (-105) . . Phylogenetics: BEAST Lab (→proportionInvariant)
- 19:09, 13 April 2016 (diff | hist) . . (+199) . . Phylogenetics: BEAST Lab (→birthRate)
- 19:07, 13 April 2016 (diff | hist) . . (+24) . . Phylogenetics: BEAST Lab (→Tree)
- 19:06, 13 April 2016 (diff | hist) . . (+259) . . Phylogenetics: BEAST Lab (→Setting up the Clock Model)
- 19:01, 13 April 2016 (diff | hist) . . (+234) . . Phylogenetics: BEAST Lab (→Setting up the Site Model)
- 18:58, 13 April 2016 (diff | hist) . . (+33) . . Phylogenetics: BEAST Lab (→Setting up the Site Model)
- 18:57, 13 April 2016 (diff | hist) . . (-165) . . Phylogenetics: BEAST Lab (→Setting BEAUTi's mode)
- 18:23, 13 April 2016 (diff | hist) . . (+617) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 17:57, 13 April 2016 (diff | hist) . . (+107) . . Phylogenetics: BEAST Lab (→Running BEAST on the cluster)
- 17:55, 13 April 2016 (diff | hist) . . (+1,077) . . Phylogenetics: BEAST Lab (→Running BEAST on the cluster)
- 17:46, 13 April 2016 (diff | hist) . . (+5) . . Phylogenetics: BEAST Lab (→Setting the mode)
- 17:46, 13 April 2016 (diff | hist) . . (+160) . . Phylogenetics: BEAST Lab (→Setting up the Site Model)
- 17:45, 13 April 2016 (diff | hist) . . (-167) . . Phylogenetics: BEAST Lab (→Setting up the Priors)
- 17:45, 13 April 2016 (diff | hist) . . (+275) . . Phylogenetics: BEAST Lab (→Setting up the Priors)
- 17:41, 13 April 2016 (diff | hist) . . (+37) . . Phylogenetics: BEAST Lab (→Saving the XML file)
- 17:33, 13 April 2016 (diff | hist) . . (+1,708) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 17:10, 13 April 2016 (diff | hist) . . (+164) . . Phylogenetics: BEAST Lab (→Download BEAUTi and BEAST)
- 17:08, 13 April 2016 (diff | hist) . . (+410) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 17:05, 13 April 2016 (diff | hist) . . (+474) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 16:51, 13 April 2016 (diff | hist) . . (+12) . . Phylogenetics: BEAST Lab (→Analysis of simulated data)
- 16:51, 13 April 2016 (diff | hist) . . (+112) . . Phylogenetics: BEAST Lab (→Work through the practical)
- 16:05, 13 April 2016 (diff | hist) . . (-488) . . Phylogenetics: BEAST Lab (→Download BEAUTi and BEAST)
- 14:30, 13 April 2016 (diff | hist) . . (+21) . . Phylogenetics: BEAST Lab
- 13:43, 13 April 2016 (diff | hist) . . (+567) . . Phylogenetics: BEAST Lab
- 20:45, 4 April 2016 (diff | hist) . . (+1) . . Phylogenetics: APE Lab
- 20:44, 4 April 2016 (diff | hist) . . (+1,463) . . Phylogenetics: APE Lab (→Phylogenetic Generalized Least Squares (PGLS) regression)
- 19:58, 4 April 2016 (diff | hist) . . (+603) . . Phylogenetics: APE Lab (→Phylogenetic Generalized Least Squares (PGLS) regression)
- 19:49, 4 April 2016 (diff | hist) . . (+646) . . Phylogenetics: APE Lab (→Phylogenetic Generalized Least Squares (PGLS) regression)
- 19:41, 4 April 2016 (diff | hist) . . (+393) . . Phylogenetics: APE Lab (→Independent contrasts)
- 19:21, 4 April 2016 (diff | hist) . . (-3,865) . . Phylogenetics: APE Lab (→Independent contrasts (PREVIOUS VERSION))
- 19:20, 4 April 2016 (diff | hist) . . (-48) . . Phylogenetics: APE Lab (→Label interior nodes with the contrasts)
- 19:19, 4 April 2016 (diff | hist) . . (-68) . . Phylogenetics: APE Lab (→Compute independent contrasts)
- 19:19, 4 April 2016 (diff | hist) . . (+80) . . Phylogenetics: APE Lab (→Label interior nodes with the contrasts)
- 19:15, 4 April 2016 (diff | hist) . . (+331) . . Phylogenetics: APE Lab (→Independent contrasts)
- 18:56, 4 April 2016 (diff | hist) . . (-138) . . Phylogenetics: APE Lab (→Independent contrasts)
- 18:50, 4 April 2016 (diff | hist) . . (+3,618) . . Phylogenetics: APE Lab (→Thanks!)
- 18:47, 4 April 2016 (diff | hist) . . (+1,324) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:58, 4 April 2016 (diff | hist) . . (+892) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:34, 4 April 2016 (diff | hist) . . (+6) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:33, 4 April 2016 (diff | hist) . . (+251) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:25, 4 April 2016 (diff | hist) . . (+1) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:25, 4 April 2016 (diff | hist) . . (+4) . . Phylogenetics: APE Lab (→Analyses involving tree shape)
- 17:23, 4 April 2016 (diff | hist) . . (-307) . . Phylogenetics: APE Lab (→Birth/death analysis)
- 16:53, 4 April 2016 (diff | hist) . . (+183) . . Phylogenetics: APE Lab (→Birth/death analysis)
- 16:49, 4 April 2016 (diff | hist) . . (+22) . . Phylogenetics: APE Lab (→Lineage through time plots)
- 16:45, 4 April 2016 (diff | hist) . . (+57) . . Phylogenetics: APE Lab (→Diversification analyses)
- 16:13, 4 April 2016 (diff | hist) . . (-39) . . Phylogenetics: APE Lab (→About this tree)
- 16:03, 4 April 2016 (diff | hist) . . (-7) . . Phylogenetics: APE Lab (→Reading in trees from a file)
- 02:07, 31 March 2016 (diff | hist) . . (-9) . . Phylogenetics: BayesTraits Lab (→Bayesian Reversible-jump MCMC)
- 02:05, 31 March 2016 (diff | hist) . . (+82) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 02:04, 31 March 2016 (diff | hist) . . (0) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 02:03, 31 March 2016 (diff | hist) . . (+519) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 01:41, 31 March 2016 (diff | hist) . . (+79) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 01:36, 31 March 2016 (diff | hist) . . (+133) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 01:35, 31 March 2016 (diff | hist) . . (+99) . . Phylogenetics: BayesTraits Lab (→Bayesian MCMC: Dependence model)
- 00:57, 31 March 2016 (diff | hist) . . (+101) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 00:55, 31 March 2016 (diff | hist) . . (+4) . . Phylogenetics: BayesTraits Lab (→Maximum Likelihood: Independence model)
- 00:54, 31 March 2016 (diff | hist) . . (+6) . . Phylogenetics: BayesTraits Lab (→Trait 2: Leaf venation)
- 00:54, 31 March 2016 (diff | hist) . . (-55) . . Phylogenetics: BayesTraits Lab (→Trait 2: Leaf venation)
- 00:52, 31 March 2016 (diff | hist) . . (+6) . . Phylogenetics: BayesTraits Lab (→Trait 2: Leaf venation)
- 00:52, 31 March 2016 (diff | hist) . . (+5) . . Phylogenetics: BayesTraits Lab (→Trait 1: Leaf dissection)
- 00:51, 31 March 2016 (diff | hist) . . (+9) . . Phylogenetics: BayesTraits Lab (→Download the tree and data files)
- 15:34, 21 March 2016 (diff | hist) . . (-25) . . Phylogenetics: HyPhy Lab (→Assign a substitution model to your partition)
- 14:58, 21 March 2016 (diff | hist) . . (+86) . . Phylogenetics: HyPhy Lab (→Computing the likelihood under a partially-constrained model)
- 14:58, 21 March 2016 (diff | hist) . . (+602) . . Phylogenetics: HyPhy Lab (→Computing the likelihood under a partially-constrained model)
- 14:49, 21 March 2016 (diff | hist) . . (+14) . . Phylogenetics: HyPhy Lab (→Saving the results)
- 14:45, 21 March 2016 (diff | hist) . . (+744) . . Phylogenetics: HyPhy Lab (→Computing the likelihood under a partially-constrained model)
- 14:29, 21 March 2016 (diff | hist) . . (+98) . . Phylogenetics: HyPhy Lab (→Performing a model comparison)
- 14:19, 21 March 2016 (diff | hist) . . (+381) . . Phylogenetics: HyPhy Lab (→Performing a model comparison)
- 14:06, 21 March 2016 (diff | hist) . . (+24) . . Phylogenetics: HyPhy Lab (→Viewing the tree and obtaining information about branches)
- 04:27, 21 March 2016 (diff | hist) . . (-27) . . Phylogenetics: HyPhy Lab (→Saving the results)
- 04:26, 21 March 2016 (diff | hist) . . (+307) . . Phylogenetics: HyPhy Lab (→Saving the results)
- 23:36, 17 March 2016 (diff | hist) . . (+3) . . Phylogenetics: HyPhy Lab (→Obtaining the sequences)
- 23:35, 17 March 2016 (diff | hist) . . (-13) . . Phylogenetics: HyPhy Lab (→Obtaining the sequences)
- 23:34, 17 March 2016 (diff | hist) . . (+57) . . Phylogenetics: HyPhy Lab (→Obtaining the sequences)
- 23:32, 17 March 2016 (diff | hist) . . (-25) . . Phylogenetics: HyPhy Lab (→Obtaining the sequences)
- 23:29, 17 March 2016 (diff | hist) . . (+51) . . Phylogenetics: HyPhy Lab (→Obtaining the sequences)
- 17:07, 10 March 2016 (diff | hist) . . (+146) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Spacing the stepping stones)
- 17:06, 10 March 2016 (diff | hist) . . (+69) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 17:04, 10 March 2016 (diff | hist) . . (+370) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 16:58, 10 March 2016 (diff | hist) . . (+300) . . N File:Alpha-1.0.png (Power posterior distributions when the powers to which the likelihood is raised are evenly spaced. This results in a very uneven spacing of densities. Compare with Alpha-0.17.pdf, which shows a case in which powers are unevenly spaced but results in a...) (current)
- 16:56, 10 March 2016 (diff | hist) . . (+354) . . File:Alpha-0.17.png (current)
- 16:56, 10 March 2016 (diff | hist) . . (0) . . N File:Alpha-0.17.png
- 16:44, 10 March 2016 (diff | hist) . . (+354) . . N File:Steppingstone-alpha0.17.pdf (Power posterior distributions when the powers to which the likelihood is raised are evenly spaced quantiles from a Beta(0.17,1) distribution. This results in a fairly even spacing of densities. Compare with steppingston-alpha1.0.pdf, which shows a case...) (current)
- 16:12, 10 March 2016 (diff | hist) . . (0) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 16:01, 10 March 2016 (diff | hist) . . (-141) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
- 15:56, 10 March 2016 (diff | hist) . . (-28) . . Phylogenetics: Morphology and Partitioning in MrBayes (→Estimating the marginal likelihood using the stepping-stone method)
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