#NEXUS begin taxa; dimensions ntax=5; taxlabels Aquifex Deinococcus Thermotoga Bacillus Thermus; end; begin characters; dimensions nChar=1273; format datatype=dna gap=-; matrix Aquifex ctcagcgcgaacgctggcggcgtgcctaacacatgcaagtcgtgcgcagagcggcaaacg ggtgagtaacacgtgggtaacctacccccaggagggggataaccccgggaaaccggggct aataccccataaagccgatgggcccgcggcccatcaggtagttggtggggtaacggccca ccaagcctatgacgggtagccggcctgagagggtggccggccacagcgggactgagacac ggcccgcacccctacggggggcagcagtggggaatcgtgggcaatgggcgaaagcctgac cccgcgacgccgcgtgggggaagaagccctgcggggtgtaaacccctgtcgggggggacg tgacggtacccccagaggggacggctaactacgtgccagcagccgcggtaatacgtaggt cccgagcgttgcgcgaagtcactgggcgtaaagcgtccgcagccggtcgggtaagcggga tgtcaaagcccacggctcaaccgtggaatggcatcccgaactgcccgacttgaggcacgc ccgggcaggcggaattcccggggtagcggtgaaatgcgtagatctcgggaggaacaccga aggggaagccagcctgctggggctgtcctgacggtcagggacgaaagccgggggagcgaa ccggattagatacccgggtagtcccggccgtaaaccatgggcgctagggctgcaggctcg cagctaacgcgttaagcgccccgcctggggagtacgggcgcaagcctgaaactcaaagga attggcgggggcccgcacaaccggtggagcgtctggttcaattcgatgctaaccgaagaa ccttacccgggcttgacatggcacaggtggtgcatggccgtcgtcagctcgtgtcgtgag atgttgggttaagtcccgcaacgagcgcaacccctgcccctagttgctgagcactctagg gggaccgccggcgccggaggaagggggggatgacgtcaggtcagtatgccctttatgccc ggggccacacaggcgctacagtggccgggacaatgggaagcgaccccgcaagggggagct aatcccagaaacccggtcatggtgcggattgggggctgaaactcgcccccatgaagccgg aatcggtagtaacggggtatcagcgatgtccccgtgaatacgttctcgggccttgcacac accgcccgtcacgccacggaagtcggtccggccggaaggactggggcgaagtcgtaacaa ggtagccgtaggg Deinococcus ctcagggtgaacgctggcggcgtgcttaagacatgcaagtcgaacgcggagtggcgcacg ggtgagtaacacgtaactgacctacccagaagtcatgaataactggccgaaaggtcagct aatacgtgatgtggtggatggggttgcgttccatcagctggttggtggggtaaaggccta ccaaggcgacgacggatagccggcctgagagggtggccggccacaggggcactgagacac gggtcccactcctacgggaggcagcagttaggaatcttccacaatgggcgcaagcctgat ggagcgacgccgcgtgagggatgaaggttttcggatcgtaaacctctgaatctggg-acg tgacggtaccagagtaagcaccggctaactccgtgccagcagccgcggtaatacggaggg tgcaagcgttacccggaatcactgggcgtaaagggcgtgtaggcggatatttaagtctgg ttttaaagaccgaggctcaacctcgggagtggactggatactggatgtcttgacctctgg agaggtaactggaattcctggtgtagcggtggaatgcgtagataccaggaggaacaccaa tggcgaaggcaagttactggacagaaggtgacgctgaggcgcgaaagtgtggggagcaaa ccggattagatacccgggtagtccacaccctaaacgatgtacgttggctaatgcttggcg aagctaacgcgataaacgtaccgcctgggaagtacggccgcaaggttgaaactcaaagga attgacgggggcccgcacaagcggtggagcatgtggtttaattcgaagcaacgcgaagaa ccttaccaggtcttgacatgacacaggtgctgcatggctgtcgtcagctcgtgtcgtgag atgttgggttaagtcccgcaacgagcgcaacccttgcttccagttgccgggcactctgga gggactgcctgtgcaggaggaaggcggggatgacgtctagtcagcatggtccttacgtcc tgggctacacacgtgctacaatggataggacaacgcgcagcaaacatgtgagtgtaagcg aatcgctgaaacctatccccagttcagatcggagtctgcaactcgactccgtgaagttgg aatcgctagtaatcgcgggtcagc-ataccgcggtgaatacgttcccgggccttgtacac accgcccgtcacaccatgggagtagattgcagttgaaagactggggtgaagtcgtaacaa ggtaactgtaccg Thermotoga ctcagggtgaacgctggcggcgtgcctaacacatgcaagtcgagcggggagcggcggacg ggtgagtaacacgtgggtaacctgccctccggagggggataaccaggggaaaccctggct aataccccatacgctcgaggggcccgcggcccatcaggtagttggtggggtaacggccca ccaagccgacgacgggtagccggcctgagagggtggtcggccacaggggcactgagacac gggccccactcctacgggaggcagcagtggggaatcttggacaatgggggaaaccctgat ccagcgacgccgcgtgcgggacgaagcccttcggggtgtaaaccgctgtggcgggggaag tgacggtaccccgctaggccccggctaactacgtgccagcagccgcggtaatacgtaggg ggcaagcgttacccggatttactgggcgtaaagggggcgtaggcggcctggtgtgtcgga tgtgaaatcccacggctcaaccgtggggctgcatccgaaactaccaggcttgggggcggt agagggagacggaactgccggtgtaggggtgaaatccgtagatatcggcaggaacgccgg tggggaagccggtctcctgggccgaccccgacgctgaggcccgaaagccaggggagcaaa ccggattagatacccgggtagtcctggctgtaaacgatgcccactaggtgttccgtgctg aagctaacgcgttaagtgggccgcctggggagtacgcccgcaagggtgaaactcaaagga attgacgggggcccgcacaagcggtggagcgtgtggtttaattggatgctaagccaagaa ccttaccagggcttgacatggcacaggtggtgcacggccgtcgtcagctcgtgccgtgag gtgttgggttaagtcccgcaacgagcgcaacccctgcccctagttgccgggcactctagg gggactgccggcgccggaggaaggaggggatgacgtcaggtactcgtgccccttatgccc tgggcgacacacgcgctacaatgggcggtacaatgggttgcgaccccgcgagggggagcc aatccc-caaagccgccctcagttcggatcgcaggctgcaacccgcctgcgtgaagccgg aatcgctagtaatcgcggatcagccatgccgcggtgaatacgttcccgggccttgtacac accgcccgtcacgccacccgagtcgggggctcccgaaggaggggggcgaagtcgtaacaa ggtagccgtaccg Bacillus ctcaggacgaacgctggcggcgtgcctaatacatgcaagtcgagcggacagcggcggacg ggtgagtaacacgtgggtaacctgcctgtaagactgggataactccgggaaaccggggct aataccggatggttgtgatggacccgcggcgcattagctagttggtgaggtaacggctca ccaaggcaacgatgcgtagccgacctgagagggtgatcggccacactgggactgagacac ggcccagactcctacgggaggcagcagtagggaatcttccgcaatggacgaaagtctgac ggagcaacgccgcgtgagtgatgaaggttttcggatcgtaaagctctgttgttagggaag tgacggtacctaaccaggccacggctaactacgtgccagcagccgcggtaatacgtaggt ggcaagcgttgtccggaattattgggcgtaaagggctcgcaggcggtttcttaagtctga tgtgaaagcccccggctcaaccggggagggtcattggaaactggggaacttgagtgcaga agaggagagtggaattccacgtgtagcggtgaaatgcgtagagatgtggaggaacaccag tggcgaaggcgactctctggtctgtaactgacgctgaggagcgaaagcgtggggagcgaa caggattagataccctggtagtccacgccgtaaacgatgagtgctaagtgtttagtgctg cagctaacgcattaagcactccgcctggggagtacggtcgcaagactgaaactcaaagga attgacgggggcccgcacaagcggtggagcatgtggtttaattcgaagcaacgcgaagaa ccttaccaggtcttgacatctgacaggtggtgcatggttgtcgtcagctcgtgtcgtgag atgttgggttaagtcccgcaacgagcgcaacccttgatcttagttgccgggcactctaag gtgactgccggtgccggaggaaggtggggatgacgtcaaatcatcatgccccttatgacc tgggctacacacgtgctacaatggacagaacaaagggcagcgaaaccgcgaggttaagcc aatcccacaaatctgttctcagttcggatcgcagtctgcaactcgactgcgtgaagctgg aatcgctagtaatcgcggatcagc-atgccgcggtgaatacgttcccgggccttgtacac accgcccgtcacaccacgagagtttgtaacacccgaaggattggggtgaagtcgtaacaa ggtagccgtatcg Thermus ctcagggtgaacgctggcggcgtgcctaagacatgcaagtcgtgcgggcagcggcggacg ggtgagtaacgcgtgggtgacctacccggaagagggggacaacccggggaaactcgggct aatcccccatgtggacgatgggcccgcgtcccatcagctagttggtggggtaatggccca ccaaggcgacgacgggtagccggtctgagaggatggccggccacaggggcactgagacac gggccccactcctacgggaggcagcagttaggaatcttccgcaatgggcgcaagcctgac ggagcgacgccgcttggaggaagaagcccttcggggtgtaaactcctgaacccggg-acg tgacggtaccggggtaagcgccggccaactccgtgccagcagccgcggtaatacggaggg cgcgagcgttacccggattcactgggcgtaaagggcgtgtaggcggcctggggcgtccca tgtgaaagaccacggctcaaccgtgggggagcgtgggatacgctcaggctagacggtggg agagggtggtggaattcccggagtagcggtgaaatgcgcagataccgggaggaacgccga tggcgaaggcagccacctggtccacccgtgacgctgaggcgcgaaagcgtggggagcaaa ccggattagatacccgggtagtccacgccctaaacgatgcgcgctaggtcttgggggccg aagctaacgcgttaagcgcgccgcctggggagtacggccgcaaggctgaaactcaaagga attgacgggggcccgcacaagcggtggagcatgtggtttaattcgaagcaacgcgaagaa ccttaccaggccttgacatggcacaggtgctgcatggccgtcgtcagctcgtgccgtgag gtgttgggttaagtcccgcaacgagcgcaacccccgccgttagttgccgggcactctaac gggactgcccgcgcgggaggaaggaggggacgacgtctggtcagcatggcccttacggcc tgggcgacacacgtgctacaatgccc--tacaaagcgatgccacccggcaacggggagct aatcgcaaaaaggtgggcccagttcggattggggtctgcaacccgaccccatgaagccgg aatcgctagtaatcgcggatcagccatgccgcggtgaatacgttcccgggccttgtacac accgcccgtcacgccatgggagcgggctctacccgaaggactggggcgaagtcgtaacaa ggtagctgtaccg ; end;