Parasite	Lineage		Genbank	Host	Host	Sample	Length		Codon
genus	name	Aliases*	number	species	location	identifier	(bp)	Start	start
Plasmodium	KZ 01	K3, PG	AY455663	Gray Catbird	Kalamazoo, MI	K14GRCA	361	641	3
Plasmodium	KZ 02		AY540195	Ovenbird	Kalamazoo, MI	K189OVEN	360	642	2
Haemoproteus	KZ 04		AY540196	Common Yellowthroat	Kalamazoo, MI	K216COYE	355	647	3
Haemoproteus	LA 01	Haemoproteus.L20, CT 01	AF465572	Scaly-breasted Thrasher	Montserrat, WI	MoMfu12, MoMft3	1128	1	1
Haemoproteus	LA 02	Haemoproteus.L36, HM2	AF465584	Pearly-eyed Thrasher	Montserrat, WI	MoMft4	853	276	2
Haemoproteus	LA 03	Haemoproteus.L04, HU3	AF465565	Scaly-breasted Thrasher	Dominica, WI	DoMfu1	1128	1	1
Haemoproteus	LA 04	Haemoproteus.L05, HU3	AF465566	Scaly-breasted Thrasher	St. Lucia, WI	SlMfu1	991	138	2
Haemoproteus	LA 05	HU3	AY167246	Bananaquit	Montserrat, WI	MoCfa1	352	650	3
Plasmodium	LA 06	Plasmodium.L53, PM1	AF465553	Trembler	Guadeloupe, WI	GuCru1	945	140	3
Haemoproteus	LA 07	Seq7, HD	AY167243	Bananaquit	Lesser Antilles		356	646	1
Haemoproteus	LA 08	Seq9, HE	AY167245	Lesser Antillean Bullfinch	Lesser Antilles		352	650	3
Plasmodium	LA 09	Seq4	AY540197	Bananaquit	St. Lucia, WI	SlCfa237	350	649	1
Haemoproteus	LA 10	HU1	AY167241	Black-whiskered Vireo	St. Vincent, WI	SvVal3	314	674	3
Haemoproteus	LA 11	HU2	AY167244	Black-whiskered Vireo	Barbuda, WI	BuVal5	313	675	2
Plasmodium	LA 12	PU3	AY167250	Black-whiskered Vireo	St. Lucia, WI	SlVal9	352	650	3
Haemoproteus	LA 13		AY540198	Bananaquit	Trinidad	TrCfa14	353	649	1
Haemoproteus	LA 14		AY540199	Bananaquit	Trinidad	TrCfa15	314	674	3
Plasmodium	LA 15		AY540200	Bananaquit	Venezuela	VeCfa11	340	653	3
Plasmodium	NA 01	Plasmodium.L47	AF465547	Red-winged Blackbird		PP 095 APH	834	137	3
Plasmodium	NA 02		AF465547	Swamp Sparrow	Mobile, AL	M85SWSP	352	647	3
Plasmodium	NA 03	Plasmodium.L48	AF465548	American Robin	St. Louis, MO	BRC 6 TMI	791	140	3
Haemoproteus	NA 04	Haemoproteus.L01	AF465562	Western Bluebird	Los Alamos, NM	1641-55824 SME	1128	1	1
Haemoproteus	NA 05	Haemoproteus.L03	AF465564	Browth Thrasher	St. Louis, MO	SI 38 TRU	968	161	3
Haemoproteus	NA 06	BRC4	AY540201	Common Crow	St. Louis, MO	BRC01-22CBRA	341	662	3
Haemoproteus	NA 07	Haemoproteus.L18	AF465570	Violet-green Swallow	Los Alamos, NM	VGSW	1128	1	1
Haemoproteus	NA 08	Haemoproteus.L33	AF465581	Dark-eyed Junco		PP 038	575	418	1
Haemoproteus	NA 09	M3, M 01, HF	AY455656	Gray Catbird	Mobile, AL	M65GRCA.seq	539	435	2
Haemoproteus	NA 10		AY540202	Red-eyed Vireo	Mobile, AL	M104REVI	521	443	3
Plasmodium	NA 11	Plasmodium.L49	AF465549	White-crowned Sparrow		PP 015 ZLE	860	139	1
Haemoproteus	NA 12	VeCph	AY540203	Northern Cardinal	Mobile, AL	M15NOCA	510	441	2
Haemoproteus	NA 13	VeCph	AY540204	Summer Tanager	Mobile, AL	M43SUTA	433	448	1
Haemoproteus	NA 14	BRC3	AY540205	Common Crow	St. Louis, MO	BRC 01-4 CBRA	989	140	3
Plasmodium	OZ 01	Seq5, PA	AY167247	Bananaquit	Lesser Antilles		808	194	3
Plasmodium	OZ 01A		AY540206	Indigo Bunting	Mobile, AL	M99INBU	391	450	2
Haemoproteus	OZ 02	OZ2, HH	AY455658	Scarlet Tanager	Ozarks, MO	Poli60(847).seq	955	174	2
Haemoproteus	OZ 02A	Haemoproteus.L35	AF465583	Scarlet Tanager	Ozarks, MO	060 Poli, 061 Prub	955	174	2
Haemoproteus	OZ 03		AF465563	Yellow-throated Warbler	Ozarks, MO	Ddom131(965).seq	965	164	3
Plasmodium	OZ 04	Seq3, PC	AY167249	Black-faced Grassquit	Lesser Antilles		355	647	3
Haemoproteus	OZ 05		AY167241	White-eyed Vireo	Ozarks, MO	Vgri139(557).seq	582	420	2
Plasmodium	OZ 06		AF465554	Worm-eating Warbler	Ozarks, MO	WrmEWrbAS25	1010	138	2
Haemoproteus	OZ 07		AF465580	Chestnut-sided Warbler	Ozarks, MO	ChstSdWrbSL23	991	138	2
Plasmodium	OZ 08		AF540207	Yellow-breasted Chat	Ozarks, MO	OZ01-141YBCH	354	648	2
Plasmodium	OZ 09		AY540208	White-eyed Vireo	Ozarks, MO	OZ01-133WEVI	340	662	3
Haemoproteus	OZ 10		AF465576	Red-eyed Vireo	Ozarks, MO	Voli011(1090).seq	1128	1	1
Haemoproteus	OZ 12	Seq8, HB	AY167240	Black-whiskered Vireo	Lesser Antilles		351	647	3
Haemoproteus	OZ 13		AY540209	Red-eyed Vireo	Ozarks, MO	OZ01-127REVI2.seq	347	656	3
Plasmodium	OZ 14	K1,BRC2	AY540210	Myrtle Warbler	Kalamazoo, MI	K260MYWA.seq	361	641	3
Haemoproteus	OZ 17	Seq2, HA	AY167239	Black-whiskered Vireo	Lesser Antilles	VAL	346	656	3
Plasmodium	OZ 19	Seq10, PE	AY455661	Bananaquit	Puerto Rico, WI	EY167BANA.seq	350	652	1
Haemoproteus	OZ 21	HC	AY167242	Red-eyed Vireo	Ozarks, MO	054VOLI	593	442	1
Plasmodium	OZ 25	K2	AY540211	Tufted Titmouse	Kalamazoo, MI	K166TUTI.seq	355	647	3
Haemoproteus	OZ 26		AY540212	Blue-headed Vireo	Kalamazoo, MI	K226BHVI	342	661	1
Haemoproteus	OZ 30		AY540213	Scarlet Tanager	Ozarks, MO	OZ25POLI	333	662	3
Haemoproteus	OZ 31		AF465582	Summer Tanager	Ozarks, MO	AS59SUTA	599	441	2
Haemoproteus	OZ 31A	Haemoproteus.L34	AF465582	Summer Tanager	Ozarks, MO	AS 59 PRU	989	140	3
Haemoproteus	OZ 32		AY540214	Eastern Towhee	Ozarks, MO	OZ14PERY	494	437	3
Haemoproteus	OZ 33		AY540215	Northern Cardinal	Ozarks, MO	OZ01-70NOCA	352	650	3
Haemoproteus	OZ 34		AY540216	Prairie Warbler	Ozarks, MO	SL16DDIS	493	441	2
Plasmodium	OZ 35	M1	AY540217	Wood Thrush	Mobile, AL	M60WOTH.seq	307	663	2
Plasmodium	OZ 35A		AY540218	Gray Catbird	Kalamazoo, MI	K154GRCA	342	661	1
Plasmodium	OZ 35B		AY540219	Gray Catbird	Kalamazoo, MI	K112GRCA	561	441	2
Plasmodium	OZ 36	Seq6, PB	AY167248	Black-whiskered Vireo	Lesser Antilles		340	653	3
Plasmodium	OZ 36A		AY540220	Red-eyed Vireo	Ozarks, MO	SL7VOLI	347	651	2
Plasmodium	OZ 38		AF465559	White-eyed Vireo	Ozarks, MO	OZ4WEVI	670	459	2
Plasmodium	OZ 42		AY540221	Yellow-breasted Chat	Ozarks, MO	OZ01-83YBCH	353	649	1
Plasmodium	OZ 45		AY540222	Blue-headed Vireo	Kalamazoo, MI	K284BHVI	351	652	1
Plasmodium	PR 01		AY540223	Black-faced Grassquit	Puerto Rico, WI	GF305BFGR	347	655	1
Haemoproteus	PR 02		AY540224	Puerto Rican Bullfinch	Puerto Rico, WI	PrLpo24	337	658	1
Haemoproteus	PR 03	Seq13, HI	AY455659	Hooded Warbler	Mobile, AL	M41HOWA	489	441	2
Plasmodium		P. falciparum		Human			1128	1	1
*Aliases named Haemoproteus.L00 or Plasmodium.L00 refer to sequence identifiers in Ricklefs and Fallon (2002). Aliases beginning with H or P
*Aliases beginning with H or P refer to sequence identifiers in Fallon et al. (2003).
Ricklefs, R. E., and S. M. Fallon. 2002. Diversification and host switching in avian malaria parasites. Proceedings of the Royal Society of London B 269: 885-892.
Fallon, S. M., E. Bermingham, and R. E. Ricklefs. 2003. Island and taxon effects in parasitism revisited: avian malaria in the Lesser Antilles. Evolution 57(3): 606-615.