Parasite

Lineage

 

Genbank

Host

Host

Sample

Length

 

Codon

genus

name

Aliases*

number

species

location

identifier

(bp)

Start

start

Plasmodium

KZ 01

K3, PG

AY455663

Gray Catbird

Kalamazoo, MI

K14GRCA

361

641

3

Plasmodium

KZ 02

 

AY540195

Ovenbird

Kalamazoo, MI

K189OVEN

360

642

2

Haemoproteus

KZ 04

 

AY540196

Common Yellowthroat

Kalamazoo, MI

K216COYE

355

647

3

Haemoproteus

LA 01

Haemoproteus.L20, CT 01

AF465572

Scaly-breasted Thrasher

Montserrat, WI

MoMfu12, MoMft3

1128

1

1

Haemoproteus

LA 02

Haemoproteus.L36, HM2

AF465584

Pearly-eyed Thrasher

Montserrat, WI

MoMft4

853

276

2

Haemoproteus

LA 03

Haemoproteus.L04, HU3

AF465565

Scaly-breasted Thrasher

Dominica, WI

DoMfu1

1128

1

1

Haemoproteus

LA 04

Haemoproteus.L05, HU3

AF465566

Scaly-breasted Thrasher

St. Lucia, WI

SlMfu1

991

138

2

Haemoproteus

LA 05

HU3

AY167246

Bananaquit

Montserrat, WI

MoCfa1

352

650

3

Plasmodium

LA 06

Plasmodium.L53, PM1

AF465553

Trembler

Guadeloupe, WI

GuCru1

945

140

3

Haemoproteus

LA 07

Seq7, HD

AY167243

Bananaquit

Lesser Antilles

 

356

646

1

Haemoproteus

LA 08

Seq9, HE

AY167245

Lesser Antillean Bullfinch

Lesser Antilles

 

352

650

3

Plasmodium

LA 09

Seq4

AY540197

Bananaquit

St. Lucia, WI

SlCfa237

350

649

1

Haemoproteus

LA 10

HU1

AY167241

Black-whiskered Vireo

St. Vincent, WI

SvVal3

314

674

3

Haemoproteus

LA 11

HU2

AY167244

Black-whiskered Vireo

Barbuda, WI

BuVal5

313

675

2

Plasmodium

LA 12

PU3

AY167250

Black-whiskered Vireo

St. Lucia, WI

SlVal9

352

650

3

Haemoproteus

LA 13

 

AY540198

Bananaquit

Trinidad

TrCfa14

353

649

1

Haemoproteus

LA 14

 

AY540199

Bananaquit

Trinidad

TrCfa15

314

674

3

Plasmodium

LA 15

 

AY540200

Bananaquit

Venezuela

VeCfa11

340

653

3

Plasmodium

NA 01

Plasmodium.L47

AF465547

Red-winged Blackbird

 

PP 095 APH

834

137

3

Plasmodium

NA 02

 

AF465547

Swamp Sparrow

Mobile, AL

M85SWSP

352

647

3

Plasmodium

NA 03

Plasmodium.L48

AF465548

American Robin

St. Louis, MO

BRC 6 TMI

791

140

3

Haemoproteus

NA 04

Haemoproteus.L01

AF465562

Western Bluebird

Los Alamos, NM

1641-55824 SME

1128

1

1

Haemoproteus

NA 05

Haemoproteus.L03

AF465564

Browth Thrasher

St. Louis, MO

SI 38 TRU

968

161

3

Haemoproteus

NA 06

BRC4

AY540201

Common Crow

St. Louis, MO

BRC01-22CBRA

341

662

3

Haemoproteus

NA 07

Haemoproteus.L18

AF465570

Violet-green Swallow

Los Alamos, NM

VGSW

1128

1

1

Haemoproteus

NA 08

Haemoproteus.L33

AF465581

Dark-eyed Junco

 

PP 038

575

418

1

Haemoproteus

NA 09

M3, M 01, HF

AY455656

Gray Catbird

Mobile, AL

M65GRCA.seq

539

435

2

Haemoproteus

NA 10

 

AY540202

Red-eyed Vireo

Mobile, AL

M104REVI

521

443

3

Plasmodium

NA 11

Plasmodium.L49

AF465549

White-crowned Sparrow

 

PP 015 ZLE

860

139

1

Haemoproteus

NA 12

VeCph

AY540203

Northern Cardinal

Mobile, AL

M15NOCA

510

441

2

Haemoproteus

NA 13

VeCph

AY540204

Summer Tanager

Mobile, AL

M43SUTA

433

448

1

Haemoproteus

NA 14

BRC3

AY540205

Common Crow

St. Louis, MO

BRC 01-4 CBRA

989

140

3

Plasmodium

OZ 01

Seq5, PA

AY167247

Bananaquit

Lesser Antilles

 

808

194

3

Plasmodium

OZ 01A

 

AY540206

Indigo Bunting

Mobile, AL

M99INBU

391

450

2

Haemoproteus

OZ 02

OZ2, HH

AY455658

Scarlet Tanager

Ozarks, MO

Poli60(847).seq

955

174

2

Haemoproteus

OZ 02A

Haemoproteus.L35

AF465583

Scarlet Tanager

Ozarks, MO

060 Poli, 061 Prub

955

174

2

Haemoproteus

OZ 03

 

AF465563

Yellow-throated Warbler

Ozarks, MO

Ddom131(965).seq

965

164

3

Plasmodium

OZ 04

Seq3, PC

AY167249

Black-faced Grassquit

Lesser Antilles

 

355

647

3

Haemoproteus

OZ 05

 

AY167241

White-eyed Vireo

Ozarks, MO

Vgri139(557).seq

582

420

2

Plasmodium

OZ 06

 

AF465554

Worm-eating Warbler

Ozarks, MO

WrmEWrbAS25

1010

138

2

Haemoproteus

OZ 07

 

AF465580

Chestnut-sided Warbler

Ozarks, MO

ChstSdWrbSL23

991

138

2

Plasmodium

OZ 08

 

AF540207

Yellow-breasted Chat

Ozarks, MO

OZ01-141YBCH

354

648

2

Plasmodium

OZ 09

 

AY540208

White-eyed Vireo

Ozarks, MO

OZ01-133WEVI

340

662

3

Haemoproteus

OZ 10

 

AF465576

Red-eyed Vireo

Ozarks, MO

Voli011(1090).seq

1128

1

1

Haemoproteus

OZ 12

Seq8, HB

AY167240

Black-whiskered Vireo

Lesser Antilles

 

351

647

3

Haemoproteus

OZ 13

 

AY540209

Red-eyed Vireo

Ozarks, MO

OZ01-127REVI2.seq

347

656

3

Plasmodium

OZ 14

K1,BRC2

AY540210

Myrtle Warbler

Kalamazoo, MI

K260MYWA.seq

361

641

3

Haemoproteus

OZ 17

Seq2, HA

AY167239

Black-whiskered Vireo

Lesser Antilles

VAL

346

656

3

Plasmodium

OZ 19

Seq10, PE

AY455661

Bananaquit

Puerto Rico, WI

EY167BANA.seq

350

652

1

Haemoproteus

OZ 21

HC

AY167242

Red-eyed Vireo

Ozarks, MO

054VOLI

593

442

1

Plasmodium

OZ 25

K2

AY540211

Tufted Titmouse

Kalamazoo, MI

K166TUTI.seq

355

647

3

Haemoproteus

OZ 26

 

AY540212

Blue-headed Vireo

Kalamazoo, MI

K226BHVI

342

661

1

Haemoproteus

OZ 30

 

AY540213

Scarlet Tanager

Ozarks, MO

OZ25POLI

333

662

3

Haemoproteus

OZ 31

 

AF465582

Summer Tanager

Ozarks, MO

AS59SUTA

599

441

2

Haemoproteus

OZ 31A

Haemoproteus.L34

AF465582

Summer Tanager

Ozarks, MO

AS 59 PRU

989

140

3

Haemoproteus

OZ 32

 

AY540214

Eastern Towhee

Ozarks, MO

OZ14PERY

494

437

3

Haemoproteus

OZ 33

 

AY540215

Northern Cardinal

Ozarks, MO

OZ01-70NOCA

352

650

3

Haemoproteus

OZ 34

 

AY540216

Prairie Warbler

Ozarks, MO

SL16DDIS

493

441

2

Plasmodium

OZ 35

M1

AY540217

Wood Thrush

Mobile, AL

M60WOTH.seq

307

663

2

Plasmodium

OZ 35A

 

AY540218

Gray Catbird

Kalamazoo, MI

K154GRCA

342

661

1

Plasmodium

OZ 35B

 

AY540219

Gray Catbird

Kalamazoo, MI

K112GRCA

561

441

2

Plasmodium

OZ 36

Seq6, PB

AY167248

Black-whiskered Vireo

Lesser Antilles

 

340

653

3

Plasmodium

OZ 36A

 

AY540220

Red-eyed Vireo

Ozarks, MO

SL7VOLI

347

651

2

Plasmodium

OZ 38

 

AF465559

White-eyed Vireo

Ozarks, MO

OZ4WEVI

670

459

2

Plasmodium

OZ 42

 

AY540221

Yellow-breasted Chat

Ozarks, MO

OZ01-83YBCH

353

649

1

Plasmodium

OZ 45

 

AY540222

Blue-headed Vireo

Kalamazoo, MI

K284BHVI

351

652

1

Plasmodium

PR 01

 

AY540223

Black-faced Grassquit

Puerto Rico, WI

GF305BFGR

347

655

1

Haemoproteus

PR 02

 

AY540224

Puerto Rican Bullfinch

Puerto Rico, WI

PrLpo24

337

658

1

Haemoproteus

PR 03

Seq13, HI

AY455659

Hooded Warbler

Mobile, AL

M41HOWA

489

441

2

Plasmodium

 

P. falciparum

 

Human

 

 

1128

1

1

 

 

 

 

 

 

 

 

 

 

*Aliases named Haemoproteus.L00 or Plasmodium.L00 refer to sequence identifiers in Ricklefs and Fallon (2002). Aliases beginning with H or P

 

 

 

*Aliases beginning with H or P refer to sequence identifiers in Fallon et al. (2003).

 

 

 

 

 

Ricklefs, R. E., and S. M. Fallon. 2002. Diversification and host switching in avian malaria parasites. Proceedings of the Royal Society of London B 269: 885-892.

Fallon, S. M., E. Bermingham, and R. E. Ricklefs. 2003. Island and taxon effects in parasitism revisited: avian malaria in the Lesser Antilles. Evolution 57(3): 606-615.