Difference between revisions of "Phycas Home"
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| − | '''Phycas''' is a Python | + | '''Phycas''' is a Python extension for carrying out Bayesian phylogenetic analyses. |
| + | <!-- The current version (2.0.0) was posted here July 12, 2014. --> | ||
| + | <!-- The current version (2.0.1) was posted here August 5, 2014. --> | ||
| + | <!-- The current version (2.1.0) was posted here August 13, 2014. --> | ||
| + | The current version (2.2.0) was posted here December 14, 2014. | ||
| + | While it should be possible to build Phycas on most Linux systems, we can only provide pre-built versions for a couple of different combinations of operating system and Python version. | ||
| + | == Manual == | ||
| + | |||
| + | * Download [http://hydrodictyon.eeb.uconn.edu/projects/phycas/downloads/v2.2/phycas-manual-2.2.0.pdf phycas-manual-2.2.0.pdf] | ||
| + | |||
| + | == Pre-built version for MacOS 10.9 (Mavericks) == | ||
| + | |||
| + | # Download [http://hydrodictyon.eeb.uconn.edu/projects/phycas/downloads/v2.2/phycas-2.2.0-mac.tar.gz phycas-2.2.0-mac.tar.gz] | ||
| + | # Follow directions in the manual to install | ||
| + | |||
| + | == Pre-built 32-bit version for Windows 7/8, Python 2.7 == | ||
| + | |||
| + | # Download [http://hydrodictyon.eeb.uconn.edu/projects/phycas/downloads/v2.2/phycas-2.2.0-win.zip phycas-2.2.0-win.zip] | ||
| + | # Follow directions in the manual to install | ||
| + | |||
| + | == Build from source on Linux == | ||
| + | |||
| + | # Download [http://hydrodictyon.eeb.uconn.edu/projects/phycas/downloads/v2.2/phycas-2.2.0-src.tar.gz phycas-2.2.0-src.tar.gz] | ||
| + | # Download [http://hydrodictyon.eeb.uconn.edu/projects/phycas/downloads/v2.2/INSTALL INSTALL] | ||
| + | # Follow directions in the INSTALL file to build a version from source | ||
| + | |||
| + | == Problems? == | ||
| + | |||
| + | Version 2.0 was a major revision, and we have changed the way we distribute Phycas, so it is quite possible that there are glitches that need to be worked out. If you have problems getting Phycas to work, please write to [mailto:paul.lewis@uconn.edu Paul Lewis]. | ||
| + | |||
| + | <!-- | ||
=== New version 1.2.0 posted August 9, 2010 === | === New version 1.2.0 posted August 9, 2010 === | ||
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[[Phycas Development Team]] | [[Phycas Development Team]] | ||
| − | |||
=== Current version 1.1.2 posted March 13, 2009 === | === Current version 1.1.2 posted March 13, 2009 === | ||
Latest revision as of 02:30, 27 August 2015
Phycas is a Python extension for carrying out Bayesian phylogenetic analyses. The current version (2.2.0) was posted here December 14, 2014. While it should be possible to build Phycas on most Linux systems, we can only provide pre-built versions for a couple of different combinations of operating system and Python version.
Contents
Manual
- Download phycas-manual-2.2.0.pdf
Pre-built version for MacOS 10.9 (Mavericks)
- Download phycas-2.2.0-mac.tar.gz
- Follow directions in the manual to install
Pre-built 32-bit version for Windows 7/8, Python 2.7
- Download phycas-2.2.0-win.zip
- Follow directions in the manual to install
Build from source on Linux
- Download phycas-2.2.0-src.tar.gz
- Download INSTALL
- Follow directions in the INSTALL file to build a version from source
Problems?
Version 2.0 was a major revision, and we have changed the way we distribute Phycas, so it is quite possible that there are glitches that need to be worked out. If you have problems getting Phycas to work, please write to Paul Lewis.
