Difference between revisions of "Phylogenetics: HyPhy Lab"

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|<span style="font-size: x-large">[http://hydrodictyon.eeb.uconn.edu/eebedia/index.php/Phylogenetics:_Syllabus EEB 349: Phylogenetics]</span>
 
|<span style="font-size: x-large">[http://hydrodictyon.eeb.uconn.edu/eebedia/index.php/Phylogenetics:_Syllabus EEB 349: Phylogenetics]</span>
 
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|The goal of this lab exercise is to show you how to use the HyPhy program for data exploration and hypothesis testing within a maximum likelihood framework.
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|The goal of this lab exercise is to show you how to use the [http://www.hyphy.org/ HyPhy] program for data exploration and hypothesis testing within a maximum likelihood framework.
 
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Revision as of 20:09, 22 February 2007

Under construction.png This article is still under construction.
Expect it to change frequently until this notice is removed.
Adiantum.png EEB 349: Phylogenetics
The goal of this lab exercise is to show you how to use the HyPhy program for data exploration and hypothesis testing within a maximum likelihood framework.

Part A: Obtaining the sequences

Part B: Using a codon model

Part C: Testing evolutionary phylogenetic hypotheses