Difference between revisions of "Evo Devo Fall2013"
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− | ===Week 1 (Aug. 27/29): Overview of evolutionary developmental biology=== | + | ===Week 1 (Aug. 27/29): Overview of evolutionary developmental biology (EJ)=== |
Discussion Leader: Elizabeth<br> | Discussion Leader: Elizabeth<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 2 (Sept. 3/5): Morphological and molecular patterns=== | + | ===Week 2 (Sept. 3/5): Morphological and molecular patterns (EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings: The developmental hourglass and the phylotypic stage<br> | Discussion Readings: The developmental hourglass and the phylotypic stage<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 3 (Sept. 10/12): The molecular building blocks of development=== | + | ===Week 3 (Sept. 10/12): The molecular building blocks of development (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 4 (Sept. 17/19): Evolution of developmental networks=== | + | ===Week 4 (Sept. 17/19): Evolution of developmental networks (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 5 (Sept. 24/26): | + | ===Week 5 (Sept. 24/26): Homology (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 6 (Oct. 1/3): | + | ===Week 6 (Oct. 1/3): Homoplasy (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
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− | ===Week 7 (Oct. 8/10): | + | ===Week 7 (Oct. 8/10): Constraints (EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 8 (Oct. 15/17): Novelty=== | + | ===Week 8 (Oct. 15/17): Novelty (EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 9 (Oct. 22/24): Morphospace=== | + | ===Week 9 (Oct. 22/24): Morphospace (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 10 (Oct. 29/31): Modularity=== | + | ===Week 10 (Oct. 29/31): Modularity (EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
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Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 11 (Nov. 5/7): Robustness and | + | ===Week 11 (Nov. 5/7): Robustness and plasticity (CS)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 12 (Nov. 12/14): | + | ===Week 12 (Nov. 12/14): Evolvability (EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> | ||
Discussion Questions:<br> | Discussion Questions:<br> | ||
− | ===Week 13 (Nov. 19/21): | + | ===Week 13 (Nov. 19/21): Case studies (CS/EJ)=== |
Discussion Leader:<br> | Discussion Leader:<br> | ||
Discussion Readings:<br> | Discussion Readings:<br> |
Revision as of 19:32, 22 August 2013
EEB 5333, Fall 2013
Evolutionary Developmental Biology
Meeting Time: Tuesdays and Thursdays, 2:00-3:15 pm, Bamford Room (TLS 171B)
Contents
- 1 Description
- 2 Instructors
- 3 Announcements and Handouts
- 4 Expectations and Grading
- 5 Topics and Readings
- 5.1 Week 1 (Aug. 27/29): Overview of evolutionary developmental biology (EJ)
- 5.2 Week 2 (Sept. 3/5): Morphological and molecular patterns (EJ)
- 5.3 Week 3 (Sept. 10/12): The molecular building blocks of development (CS)
- 5.4 Week 4 (Sept. 17/19): Evolution of developmental networks (CS)
- 5.5 Week 5 (Sept. 24/26): Homology (CS)
- 5.6 Week 6 (Oct. 1/3): Homoplasy (CS)
- 5.7 Week 7 (Oct. 8/10): Constraints (EJ)
- 5.8 Week 8 (Oct. 15/17): Novelty (EJ)
- 5.9 Week 9 (Oct. 22/24): Morphospace (CS)
- 5.10 Week 10 (Oct. 29/31): Modularity (EJ)
- 5.11 Week 11 (Nov. 5/7): Robustness and plasticity (CS)
- 5.12 Week 12 (Nov. 12/14): Evolvability (EJ)
- 5.13 Week 13 (Nov. 19/21): Case studies (CS/EJ)
- 5.14 Week 14 (Nov. 26/28): Happy Thanksgiving!
- 5.15 Week 15 (Dec. 3/5): Project Presentations
Description
This is an advanced course that explores the interface between evolutionary biology and developmental biology. In addition to considering how developmental pathways evolve, and the developmental basis of phenotypic evolution, we will ask what novel insights emerge from a synthesis of these fields. Major topics to be considered include the following: developmental constraints, homology, plasticity, novelty and evolvability.
Instructors
Dr. Elizabeth Jockusch
Office: Biology/Pharmacy 305B
Phone: (860) 486-4452
Office hours: by appointment
Dr. Carl Schlichting
Office: Torrey Life Sciences 366
Phone: (860) 486-4056
Office hours: by appointment
Announcements and Handouts
Books & Sources in Evolutionary Developmental Biology
Expectations and Grading
This course has a mixed lecture/discussion format. In general, Tuesdays will be used for lectures that provide an overview and background information. Thursdays will be dedicated to student-led discussion based on reading from the literature. We expect everyone to participate actively in the class. In order to help prepare for discussions, you should write a brief (<1 page) reaction piece to each set of readings, highlighting your thoughts about the readings, connections between them or questions raised by them. This will be handed in each week. Responsibility for leading the discussions will rotate. You are expected to complete an independent project on a topic of your choice. Ideally, your topic will be closely connected to your own research interests, and also integrate multiple topics covered in class . You should discuss your choice of topics with one of us no later than Friday, October 4. To help you stay on track, an outline and relevant references are due on Tuesday, Nov. 12. The final project paper is due Tuesday, Dec. 3, and the last week of class will be devoted to presentations and discussions based on these projects. There will be one take-home exam due the day of the Final Exam. It will consist of one or several essay questions that will ask you to integrate the knowledge that you have acquired during the course.
Deadlines
Weekly | Discussion pieces |
Friday, Oct. 4 | Independent project topic approved |
Tuesday, Nov. 12 | Independent project outline and references due |
Tuesday, Dec. 3 | Independent project paper due |
Dec. 3-5 | Independent project presentations |
Tuesday, Dec. 10 | Final exam due |
Course grade
Discussions | 35%, including participation, leading discussion, and reaction pieces |
Independent project | 40%, based on presentation (15%) and paper (25%) |
Final exam | 25% |
Topics and Readings
Week 1 (Aug. 27/29): Overview of evolutionary developmental biology (EJ)
Discussion Leader: Elizabeth
Discussion Readings:
Discussion Questions:
Week 2 (Sept. 3/5): Morphological and molecular patterns (EJ)
Discussion Leader:
Discussion Readings: The developmental hourglass and the phylotypic stage
Discussion Questions:
Week 3 (Sept. 10/12): The molecular building blocks of development (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 4 (Sept. 17/19): Evolution of developmental networks (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 5 (Sept. 24/26): Homology (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 6 (Oct. 1/3): Homoplasy (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 7 (Oct. 8/10): Constraints (EJ)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 8 (Oct. 15/17): Novelty (EJ)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 9 (Oct. 22/24): Morphospace (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 10 (Oct. 29/31): Modularity (EJ)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 11 (Nov. 5/7): Robustness and plasticity (CS)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 12 (Nov. 12/14): Evolvability (EJ)
Discussion Leader:
Discussion Readings:
Discussion Questions:
Week 13 (Nov. 19/21): Case studies (CS/EJ)
Discussion Leader:
Discussion Readings:
Discussion Questions: