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| Date | Topic | Homework | Discussion/Activities | Testing | Readings |
| Jan. 23 | Hardy-Weinberg Equilibrium | Problem Set 1 | Violations of Random Mating | pp. 141-154 | |
| Jan. 30 | Deviations from Hardy-Weinberg | Problem Set 2 | Simulations of Drift and Migration | pp. 195-224, 236-250 | |
| Feb. 6 | Natural Selection | Problem Set 3 | Simulation of selection | Ch. 3, pp. 154-182 | |
| Feb. 13 | Natural Selection II | Problem Set 4 | NONE | Exam 1 (weeks 1-2)
Study Guide Answer Key |
pp. 154-182, pp. 317-324 |
| Feb. 20 | Quantitative Traits | Problem Set 5 | Selection in Darwin's finches
Finch data set |
Ch. 8 | |
| Feb. 27 | Sexual Selection/Kin Selection | Problem
Set 6
Reading for PS 6 |
The Evolution of Cooperation | Ch. 10, 11 | |
| March 6 | SPRING BREAK | ||||
| March 13 | Speciation | Problem Set 7 | Sexual selection and speciation | Ch. 15 | |
| March 20 | Phylogenetic Trees and Character Evolution | Problem Set 8 | NONE | Exam 2 (weeks 3-6)
Study Guide |
pp. 47-49 |
| March 27 | Using Phylogenies | Problem Set 9 | Independent contrasts | pp. 344-358, 567-582 | |
| April 3 | Inferring Phylogenies | Problem Set 10 | Phylogeny of mammal skulls | pp. 50-56, 549-566 | |
| April 10 | Molecular Evolution | Problem Set 11 | Molecular clocks | pp. 221-227 | |
| April 17 | History of Life | Problem Set 12 | NONE | Exam 3 (weeks 7-10)
Study Guide |
Ch. 16, 17 |
| April 24 | Human Evolution | No Problem Set | Human Evolution | Ch. 19 | |
| May 1 | FINAL EXAM (6-8 pm) | Final Exam (comprehensive)
Study Guide |
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